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SRX5843256: Morphoseq long fragment end library of Lactobacillus jensenii, Strain JV-V16
1 ILLUMINA (Illumina NovaSeq 6000) run: 229,888 spots, 68.1M bases, 22.8Mb downloads

Design: Morphoseq long fragment end library
Submitted by: University of Technology Sydney
Study: Development & evaluation of Morphoseq synthetic long read sequencing technology
show Abstracthide Abstract
This project aims to evaluate a new method for generating synthetic long reads from short read (Illumina, BGI, etc) sequencing data. Long templates (8-10kbp) are randomly mutagenized using primer extension in the presence of the nucleotide analogue dPTP, which can base pair with A or G. The dPTP is then removed and a random set of mutations are fixed via a further primer extension in the presence of only natural nucleotides. Finally, a targeted number of the mutagenized templates are replicated with PCR and used to make a short read sequencing library. Short reads from the same template can be identified via the presence of shared mutations in overlapping regions.
Sample: MIGS Cultured Bacterial/Archaeal sample from Lactobacillus jensenii JV-V16
SAMN00001502 • SRS001976 • All experiments • All runs
Library:
Name: HM-105D
Instrument: Illumina NovaSeq 6000
Strategy: OTHER
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 229,888 spots, 68.1M bases, 22.8Mb
Run# of Spots# of BasesSizePublished
SRR9067172229,88868.1M22.8Mb2020-05-20

ID:
7852663

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